f2py Error - module crashes after several iterations...

J

John [H2O]

Hello,

I have a module created from a Fortran file to read in unformatted binary
fortran output. It works fine for some datasets, but crashes with others.
The strange thing is it will loop through several files before it crashes,
then suddently giving me this output:

*** glibc detected *** python: munmap_chunk(): invalid pointer: 0xb34ac008
***
======= Backtrace: =========
/lib/libc.so.6[0x7b0874]
/usr/lib/python2.5/site-packages/numpy/core/multiarray.so[0x44a24b]
/usr/lib/libpython2.5.so.1.0[0x55cf0cf]
/usr/lib/libpython2.5.so.1.0(PyEval_EvalCodeEx+0x579)[0x5636c59]
/usr/lib/libpython2.5.so.1.0[0x55d0eb2]
/usr/lib/libpython2.5.so.1.0(PyObject_Call+0x37)[0x55b10b7]
/usr/lib/libpython2.5.so.1.0(PyEval_EvalFrameEx+0x466f)[0x5633e7f]
/usr/lib/libpython2.5.so.1.0(PyEval_EvalCodeEx+0x695)[0x5636d75]
/usr/lib/libpython2.5.so.1.0(PyEval_EvalCode+0x63)[0x5636fd3]
/usr/lib/libpython2.5.so.1.0[0x5652542]
/usr/lib/libpython2.5.so.1.0(PyRun_FileExFlags+0x92)[0x5652602]
/usr/lib/libpython2.5.so.1.0(PyRun_SimpleFileExFlags+0x1bc)[0x5653d8c]
/usr/lib/libpython2.5.so.1.0(PyRun_AnyFileExFlags+0x7a)[0x56544fa]
/usr/lib/libpython2.5.so.1.0(Py_Main+0xc4f)[0x565e3df]
python(main+0x32)[0x80485d2]
/lib/libc.so.6(__libc_start_main+0xe6)[0x7595d6]
python[0x8048501]
======= Memory map: ========
00110000-00111000 r-xp 00110000 00:00 0 [vdso]
00111000-00115000 r-xp 00000000 fd:00 1835759
/usr/lib/python2.5/lib-dynload/stropmodule.so
00115000-00117000 rw-p 00004000 fd:00 1835759
/usr/lib/python2.5/lib-dynload/stropmodule.so
00117000-0011a000 r-xp 00000000 fd:00 1835717
/usr/lib/python2.5/lib-dynload/_localemodule.so
0011a000-0011b000 rw-p 00003000 fd:00 1835717
/usr/lib/python2.5/lib-dynload/_localemodule.so
0011b000-00121000 r-xp 00000000 fd:00 1835750
/usr/lib/python2.5/lib-dynload/operator.so
00121000-00122000 rw-p 00006000 fd:00 1835750
/usr/lib/python2.5/lib-dynload/operator.so
00122000-00128000 r-xp 00000000 fd:00 1835727
/usr/lib/python2.5/lib-dynload/_struct.so
00128000-00129000 rw-p 00006000 fd:00 1835727
/usr/lib/python2.5/lib-dynload/_struct.so
00129000-0012c000 r-xp 00000000 fd:00 1835762
/usr/lib/python2.5/lib-dynload/timemodule.so

[snip ...]

Anyone have some inputs on how to determine the cause???

Thanks,
john
 

Ask a Question

Want to reply to this thread or ask your own question?

You'll need to choose a username for the site, which only take a couple of moments. After that, you can post your question and our members will help you out.

Ask a Question

Members online

Forum statistics

Threads
473,755
Messages
2,569,536
Members
45,014
Latest member
BiancaFix3

Latest Threads

Top