Smith-Waterman Algorithm in Python

M

Muhammad Adeel

Hi,

Does any one about any implementation of classical Smith Waterman
local alignment algorithm and it's variants for aligning natural
language text?

thanks
 
P

Peter Otten

Ian said:
Every one of the first 20 entries is either the OP questions or your
reply.

Daniel - you are no help at all, and no funny.

Maybe, but the OP would have had the advantage of not seeing these entries
had he googled before asking. The first hit for

Smith Waterman in Python

is still

http://narnia.cs.ttu.edu/drupal/node/104

and finding it and evaluating it before posting here should have been
doable.

Peter
 
D

Daniel Fetchinson

Does any one about any implementation of classical Smith Waterman
Every one of the first 20 entries is either the OP questions or your reply.

And you think it was there before the OP sent his message?
Oh wait, did you just invent a time machine? :)
Daniel - you are no help at all, and no funny.

Actually, I'm damn funny! :)

Cheers,
Daniel
 
T

Terry Reedy

And you think it was there before the OP sent his message?
Oh wait, did you just invent a time machine? :)


Actually, I'm damn funny! :)

I have noticed before that people who post without searching first end
up polluting subsequent searches. Google obviously boosts the
rank of recent pages. That is because when people search for something
like "Lindsey Lohan", they most likely want the latest news rather than
a definitive biography page.
 
D

Daniel Fetchinson

Every one of the first 20 entries is either the OP questions or your
I have noticed before that people who post without searching first end
up polluting subsequent searches. Google obviously boosts the
rank of recent pages.

This is one of the three major reasons stackoverflow and friends were developed.

Cheers,
Daniel
 

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